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Automating Computational Chemistry Workflows via OpenClaw and Domain-Specific Skills

Mingwei Ding, Chen Huang, Yibo Hu, Yifan Li, Zitian Lu, Xingtai Yu, Duo Zhang, Wenxi Zhai, Tong Zhu, Qiangqiang Gu, Jinzhe Zeng

Abstract

Automating multistep computational chemistry tasks remains challenging because reasoning, workflow specification, software execution, and high-performance computing (HPC) execution are often tightly coupled. We demonstrate a decoupled agent-skill design for computational chemistry automation leveraging OpenClaw. Specifically, OpenClaw provides centralized control and supervision; schema-defined planning skills translate scientific goals into executable task specifications; domain skills encapsulate specific computational chemistry procedures; and DPDispatcher manages job execution across heterogeneous HPC environments. In a molecular dynamics (MD) case study of methane oxidation, the system completed cross-tool execution, bounded recovery from runtime failures, and reaction network extraction, illustrating a scalable and maintainable approach to multistep computational chemistry automation.

Automating Computational Chemistry Workflows via OpenClaw and Domain-Specific Skills

Abstract

Automating multistep computational chemistry tasks remains challenging because reasoning, workflow specification, software execution, and high-performance computing (HPC) execution are often tightly coupled. We demonstrate a decoupled agent-skill design for computational chemistry automation leveraging OpenClaw. Specifically, OpenClaw provides centralized control and supervision; schema-defined planning skills translate scientific goals into executable task specifications; domain skills encapsulate specific computational chemistry procedures; and DPDispatcher manages job execution across heterogeneous HPC environments. In a molecular dynamics (MD) case study of methane oxidation, the system completed cross-tool execution, bounded recovery from runtime failures, and reaction network extraction, illustrating a scalable and maintainable approach to multistep computational chemistry automation.

Paper Structure

This paper contains 8 sections, 3 figures, 1 table.

Figures (3)

  • Figure 1: Architecture of the OpenClaw-based decoupled agent-skill framework for computational chemistry automation.
  • Figure 2: (a) Schematic of the LLM-based decision-making process; (b) Workflow of the automated computational task execution process.
  • Figure 3: Workflow of the methane oxidation MD simulation.