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PaperGuide: Making Small Language-Model Paper-Reading Agents More Efficient

Zijian Wang, Tiancheng Huang, Hanqi Li, Da Ma, Lu Chen, Kai Yu

TL;DR

PaperGuide addresses the inefficiency of small LLMs in long-horizon Paper-QA by separating planning from execution through a Draft-and-Follow framework and optimizing both stages with Draft-and-Follow Policy Optimization (DFPO). It introduces DTFT for targeted pretraining of drafts and tool-use behavior, and a reward-router with negative sample masking to stabilize learning and credit assignment. Theoretical analysis shows gradient decomposition into a standard M-GRPO term plus a draft-induced bias, supporting stable training, while empirical results on AirQA-Real and SciDQA demonstrate notable efficiency gains (I-Avg) and competitive accuracy with 3B and 7B models, approaching larger baselines. Overall, PaperGuide demonstrates that hierarchical planning and specialized training can substantially improve the efficiency and reliability of small LLM agents in scientific QA tasks, with practical implications for resource-constrained deployments.

Abstract

The accelerating growth of the scientific literature makes it increasingly difficult for researchers to track new advances through manual reading alone. Recent progress in large language models (LLMs) has therefore spurred interest in autonomous agents that can read scientific papers and extract task-relevant information. However, most existing approaches rely either on heavily engineered prompting or on a conventional SFT-RL training pipeline, both of which often lead to excessive and low-yield exploration. Drawing inspiration from cognitive science, we propose PaperCompass, a framework that mitigates these issues by separating high-level planning from fine-grained execution. PaperCompass first drafts an explicit plan that outlines the intended sequence of actions, and then performs detailed reasoning to instantiate each step by selecting the parameters for the corresponding function calls. To train such behavior, we introduce Draft-and-Follow Policy Optimization (DFPO), a tailored RL method that jointly optimizes both the draft plan and the final solution. DFPO can be viewed as a lightweight form of hierarchical reinforcement learning, aimed at narrowing the `knowing-doing' gap in LLMs. We provide a theoretical analysis that establishes DFPO's favorable optimization properties, supporting a stable and reliable training process. Experiments on paper-based question answering (Paper-QA) benchmarks show that PaperCompass improves efficiency over strong baselines without sacrificing performance, achieving results comparable to much larger models.

PaperGuide: Making Small Language-Model Paper-Reading Agents More Efficient

TL;DR

PaperGuide addresses the inefficiency of small LLMs in long-horizon Paper-QA by separating planning from execution through a Draft-and-Follow framework and optimizing both stages with Draft-and-Follow Policy Optimization (DFPO). It introduces DTFT for targeted pretraining of drafts and tool-use behavior, and a reward-router with negative sample masking to stabilize learning and credit assignment. Theoretical analysis shows gradient decomposition into a standard M-GRPO term plus a draft-induced bias, supporting stable training, while empirical results on AirQA-Real and SciDQA demonstrate notable efficiency gains (I-Avg) and competitive accuracy with 3B and 7B models, approaching larger baselines. Overall, PaperGuide demonstrates that hierarchical planning and specialized training can substantially improve the efficiency and reliability of small LLM agents in scientific QA tasks, with practical implications for resource-constrained deployments.

Abstract

The accelerating growth of the scientific literature makes it increasingly difficult for researchers to track new advances through manual reading alone. Recent progress in large language models (LLMs) has therefore spurred interest in autonomous agents that can read scientific papers and extract task-relevant information. However, most existing approaches rely either on heavily engineered prompting or on a conventional SFT-RL training pipeline, both of which often lead to excessive and low-yield exploration. Drawing inspiration from cognitive science, we propose PaperCompass, a framework that mitigates these issues by separating high-level planning from fine-grained execution. PaperCompass first drafts an explicit plan that outlines the intended sequence of actions, and then performs detailed reasoning to instantiate each step by selecting the parameters for the corresponding function calls. To train such behavior, we introduce Draft-and-Follow Policy Optimization (DFPO), a tailored RL method that jointly optimizes both the draft plan and the final solution. DFPO can be viewed as a lightweight form of hierarchical reinforcement learning, aimed at narrowing the `knowing-doing' gap in LLMs. We provide a theoretical analysis that establishes DFPO's favorable optimization properties, supporting a stable and reliable training process. Experiments on paper-based question answering (Paper-QA) benchmarks show that PaperCompass improves efficiency over strong baselines without sacrificing performance, achieving results comparable to much larger models.
Paper Structure (39 sections, 6 theorems, 51 equations, 9 figures, 7 tables)

This paper contains 39 sections, 6 theorems, 51 equations, 9 figures, 7 tables.

Key Result

Proposition 3.1

In a fully on-policy settingAn analysis of DFPO's performance using off-policy rollouts is presented in app.b.1 without a KL divergence constraint, the DFPO policy gradient can be written as the sum of the M-GRPO policy gradient and an additional term arising from the draft–solution structure of the where $\Delta \hat{A}_i = c\cdot(\hat{A}^{\text{draft}}_i - \hat{A}^{\text{solution}}_i)$ is a prod

Figures (9)

  • Figure 1: The performance of PaperGuide on AirQA-Real cao2025neusym, and the training dynamics of DFPO compared with other RL training algorithms initialized from DTFT (Draft-and-Follow Fine-Tuning), 3B size. (a): Our PaperGuide achieves performance comparable to that of much larger 32B-parameter baseline models. (b): DFPO has demonstrated even more powerful efficiency.
  • Figure 2: PaperGuide. (i) We use Qwen2.5-32B-Instruct to generate complete trajectories containing draft and solution on synthetic data to fine-tune the agent. This step enables the agent to understand the basic task logic and the tool calling format. (ii) DFPO facilitates the hierarchical optimization of both the initial draft and the subsequent solution, uniquely achieving this bi-level refinement by maximizing a single objective function.
  • Figure 3: The conceptual relationship between the option framework and Draft-and-Follow framework.
  • Figure 4: Efficiency statistics of DTFT (Draft & Tool-Use Fine-Tuning) and DFPO compared to SFT baselines on AirQA-Real and SciDQA. The combination of our Draft-and-Follow architecture and the DFPO algorithm enables the agent to operate more efficiently, significantly reducing the required number of tool calls without compromising QA accuracy.
  • Figure 5: Entropy Dynamics during RL Training. Left: Average token entropy curves for the three training settings. Right: A granular view of the solution entropy, partitioned by correct and wrong final answers. The curves are ordered from top to bottom: M-GRPO w/o draft, M-GRPO w/ draft, and DFPO.
  • ...and 4 more figures

Theorems & Definitions (12)

  • Proposition 3.1: Gradient Decomposition
  • Theorem 3.2: Relative Advantage
  • proof
  • Definition 2.1: Index Partitions
  • Lemma 2.2: Coefficient of Variation Inequality
  • proof
  • Lemma 2.3: Variance Bound for Bounded Data, bhatia2000better
  • proof
  • proof
  • Proposition 4.1: Stochastic Parameter Update for Tabular Softmax Policy
  • ...and 2 more