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Enhancing Brain Tumor Segmentation Using Channel Attention and Transfer learning

Majid Behzadpour, Ebrahim Azizi, Kai Wu, Bengie L. Ortiz

TL;DR

This work tackles automated brain tumor segmentation from multimodal MRI by integrating an EfficientNetB0-augmented ResUNet, a channel attention mechanism, and an Atrous Spatial Pyramid Pooling (ASPP) module to improve multi-scale contextual learning. The proposed architecture yields improved segmentation accuracy, particularly for whole tumor and tumor core regions, as shown by higher Dice scores and favorable boundary metrics ($DSC$ and $HD95$) on BraTS 2020 and TCGA LGG datasets compared to baselines and several state-of-the-art methods. Key contributions include a powerful encoder with efficient feature extraction, targeted channel-wise feature recalibration, and multi-scale context capture, all incorporated within a residual U-Net framework. The results suggest strong potential for clinical deployment and adaptability to other medical image segmentation tasks, thanks to improved robustness and boundary delineation.

Abstract

Accurate and efficient segmentation of brain tumors is critical for diagnosis, treatment planning, and monitoring in clinical practice. In this study, we present an enhanced ResUNet architecture for automatic brain tumor segmentation, integrating an EfficientNetB0 encoder, a channel attention mechanism, and an Atrous Spatial Pyramid Pooling (ASPP) module. The EfficientNetB0 encoder leverages pre-trained features to improve feature extraction efficiency, while the channel attention mechanism enhances the model's focus on tumor-relevant features. ASPP enables multiscale contextual learning, crucial for handling tumors of varying sizes and shapes. The proposed model was evaluated on two benchmark datasets: TCGA LGG and BraTS 2020. Experimental results demonstrate that our method consistently outperforms the baseline ResUNet and its EfficientNet variant, achieving Dice coefficients of 0.903 and 0.851 and HD95 scores of 9.43 and 3.54 for whole tumor and tumor core regions on the BraTS 2020 dataset, respectively. compared with state-of-the-art methods, our approach shows competitive performance, particularly in whole tumor and tumor core segmentation. These results indicate that combining a powerful encoder with attention mechanisms and ASPP can significantly enhance brain tumor segmentation performance. The proposed approach holds promise for further optimization and application in other medical image segmentation tasks.

Enhancing Brain Tumor Segmentation Using Channel Attention and Transfer learning

TL;DR

This work tackles automated brain tumor segmentation from multimodal MRI by integrating an EfficientNetB0-augmented ResUNet, a channel attention mechanism, and an Atrous Spatial Pyramid Pooling (ASPP) module to improve multi-scale contextual learning. The proposed architecture yields improved segmentation accuracy, particularly for whole tumor and tumor core regions, as shown by higher Dice scores and favorable boundary metrics ( and ) on BraTS 2020 and TCGA LGG datasets compared to baselines and several state-of-the-art methods. Key contributions include a powerful encoder with efficient feature extraction, targeted channel-wise feature recalibration, and multi-scale context capture, all incorporated within a residual U-Net framework. The results suggest strong potential for clinical deployment and adaptability to other medical image segmentation tasks, thanks to improved robustness and boundary delineation.

Abstract

Accurate and efficient segmentation of brain tumors is critical for diagnosis, treatment planning, and monitoring in clinical practice. In this study, we present an enhanced ResUNet architecture for automatic brain tumor segmentation, integrating an EfficientNetB0 encoder, a channel attention mechanism, and an Atrous Spatial Pyramid Pooling (ASPP) module. The EfficientNetB0 encoder leverages pre-trained features to improve feature extraction efficiency, while the channel attention mechanism enhances the model's focus on tumor-relevant features. ASPP enables multiscale contextual learning, crucial for handling tumors of varying sizes and shapes. The proposed model was evaluated on two benchmark datasets: TCGA LGG and BraTS 2020. Experimental results demonstrate that our method consistently outperforms the baseline ResUNet and its EfficientNet variant, achieving Dice coefficients of 0.903 and 0.851 and HD95 scores of 9.43 and 3.54 for whole tumor and tumor core regions on the BraTS 2020 dataset, respectively. compared with state-of-the-art methods, our approach shows competitive performance, particularly in whole tumor and tumor core segmentation. These results indicate that combining a powerful encoder with attention mechanisms and ASPP can significantly enhance brain tumor segmentation performance. The proposed approach holds promise for further optimization and application in other medical image segmentation tasks.
Paper Structure (13 sections, 5 equations, 1 figure, 3 tables)

This paper contains 13 sections, 5 equations, 1 figure, 3 tables.

Figures (1)

  • Figure 1: Segmentation result provided by standard ResU-Net and Our method. This result was obtained from the test set.