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Contrastive Learning with Adaptive Neighborhoods for Brain Age Prediction on 3D Stiffness Maps

Jakob Träuble, Lucy Hiscox, Curtis Johnson, Carola-Bibiane Schönlieb, Gabriele Kaminski Schierle, Angelica Aviles-Rivero

TL;DR

This work presents the first application of self-supervised learning to brain mechanical properties, using compiled stiffness maps from various clinical studies to predict brain age, and introduces a novel contrastive loss that adapts dynamically during the training process, focusing on the localized neighborhoods of samples.

Abstract

In the field of neuroimaging, accurate brain age prediction is pivotal for uncovering the complexities of brain aging and pinpointing early indicators of neurodegenerative conditions. Recent advancements in self-supervised learning, particularly in contrastive learning, have demonstrated greater robustness when dealing with complex datasets. However, current approaches often fall short in generalizing across non-uniformly distributed data, prevalent in medical imaging scenarios. To bridge this gap, we introduce a novel contrastive loss that adapts dynamically during the training process, focusing on the localized neighborhoods of samples. Moreover, we expand beyond traditional structural features by incorporating brain stiffness - a mechanical property previously underexplored yet promising due to its sensitivity to age-related changes. This work presents the first application of self-supervised learning to brain mechanical properties, using compiled stiffness maps from various clinical studies to predict brain age. Our approach, featuring dynamic localized loss, consistently outperforms existing state-of-the-art methods, demonstrating superior performance and paving the way for new directions in brain aging research.

Contrastive Learning with Adaptive Neighborhoods for Brain Age Prediction on 3D Stiffness Maps

TL;DR

This work presents the first application of self-supervised learning to brain mechanical properties, using compiled stiffness maps from various clinical studies to predict brain age, and introduces a novel contrastive loss that adapts dynamically during the training process, focusing on the localized neighborhoods of samples.

Abstract

In the field of neuroimaging, accurate brain age prediction is pivotal for uncovering the complexities of brain aging and pinpointing early indicators of neurodegenerative conditions. Recent advancements in self-supervised learning, particularly in contrastive learning, have demonstrated greater robustness when dealing with complex datasets. However, current approaches often fall short in generalizing across non-uniformly distributed data, prevalent in medical imaging scenarios. To bridge this gap, we introduce a novel contrastive loss that adapts dynamically during the training process, focusing on the localized neighborhoods of samples. Moreover, we expand beyond traditional structural features by incorporating brain stiffness - a mechanical property previously underexplored yet promising due to its sensitivity to age-related changes. This work presents the first application of self-supervised learning to brain mechanical properties, using compiled stiffness maps from various clinical studies to predict brain age. Our approach, featuring dynamic localized loss, consistently outperforms existing state-of-the-art methods, demonstrating superior performance and paving the way for new directions in brain aging research.
Paper Structure (13 sections, 4 equations, 8 figures, 3 tables, 1 algorithm)

This paper contains 13 sections, 4 equations, 8 figures, 3 tables, 1 algorithm.

Figures (8)

  • Figure 1: Graphical Illustration of Our Proposed Method. Throughout training (top to bottom), the repulsion is progressively localized as the number of samples, selected as nearest neighbors, are gradually decreased. The circle radii correspond to the label values of the samples, with larger circles representing older samples and smaller circles corresponding to younger samples.
  • Figure 2: Comparison of Neuroimaging Modalities. Each row shows three orthogonal views (sagittal, coronal, and axial) of the brain images, highlighting the differences in mechanical and structural properties across different ages.
  • Figure 3: Age Distribution of Participants from Multi-Site MR Elastography Studies. Contribution to the 311 healthy control (HC) stiffness brain maps of different clinical studies is highlighted in color. The distribution is bimodal, indicating two predominant age groups among the subjects.
  • Figure 4: Ablation studies show the impact of distance norms, regression losses, augmentations, and projection mapping on model performance, with the Manhattan norm, MSE loss, Cutout augmentation, and projection mapping achieving the best results, respectively.
  • Figure 5: UMAP visualizations of representations show model improvements throughout various learning stages. As epochs increase, the clusters become more distinct and separate, indicating a more defined representation of the underlying data features.
  • ...and 3 more figures