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The Decaying Missing-at-Random Framework: Model Doubly Robust Causal Inference with Partially Labeled Data

Yuqian Zhang, Abhishek Chakrabortty, Jelena Bradic

TL;DR

This work tackles causal effect estimation when outcomes are partially labeled in large observational studies by introducing a decaying missing-at-random framework that couples labeling bias with missing outcomes. It develops two robust estimators, bias-reduced SS (BRSS) and de-coupled BRSS (DC-BRSS), that achieve model-DR and sparsity-DR properties under high-dimensional confounding and decaying labeling, with adaptive rate double robustness governed by the effective sample size $Na_N$. BRSS leverages targeted nuisance losses and asymmetric cross-fitting to reduce bias under misspecification, while DC-BRSS decouples labeling from treatment, enabling fully nonparametric treatment-propensity estimation via IPW integration. Theoretical results establish CAN inference under weaker sparsity and overlap conditions and provide adaptive rates that depend on the decaying labeling mechanism; extensive simulations and a pseudo-random ACIC dataset demonstrate robustness to labeling bias and model misspecification. The framework thus offers practical tools for reliable causal inference in semi-supervised, high-dimensional settings, with implications for generalizability and data integration in observational studies.

Abstract

In modern large-scale observational studies, data collection constraints often result in partially labeled datasets, posing challenges for reliable causal inference, especially due to potential labeling bias and relatively small size of the labeled data. This paper introduces a decaying missing-at-random (decaying MAR) framework and associated approaches for doubly robust causal inference on treatment effects in such semi-supervised (SS) settings. This simultaneously addresses selection bias in the labeling mechanism and the extreme imbalance between labeled and unlabeled groups, bridging the gap between the standard SS and missing data literatures, while throughout allowing for confounded treatment assignment and high-dimensional confounders under appropriate sparsity conditions. To ensure robust causal conclusions, we propose a bias-reduced SS (BRSS) estimator for the average treatment effect, a type of 'model doubly robust' estimator appropriate for such settings, establishing asymptotic normality at the appropriate rate under decaying labeling propensity scores, provided that at least one nuisance model is correctly specified. Our approach also relaxes sparsity conditions beyond those required in existing methods, including standard supervised approaches. Recognizing the asymmetry between labeling and treatment mechanisms, we further introduce a de-coupled BRSS (DC-BRSS) estimator, which integrates inverse probability weighting (IPW) with bias-reducing techniques in nuisance estimation. This refinement further weakens model specification and sparsity requirements. Numerical experiments confirm the effectiveness and adaptability of our estimators in addressing labeling bias and model misspecification.

The Decaying Missing-at-Random Framework: Model Doubly Robust Causal Inference with Partially Labeled Data

TL;DR

This work tackles causal effect estimation when outcomes are partially labeled in large observational studies by introducing a decaying missing-at-random framework that couples labeling bias with missing outcomes. It develops two robust estimators, bias-reduced SS (BRSS) and de-coupled BRSS (DC-BRSS), that achieve model-DR and sparsity-DR properties under high-dimensional confounding and decaying labeling, with adaptive rate double robustness governed by the effective sample size . BRSS leverages targeted nuisance losses and asymmetric cross-fitting to reduce bias under misspecification, while DC-BRSS decouples labeling from treatment, enabling fully nonparametric treatment-propensity estimation via IPW integration. Theoretical results establish CAN inference under weaker sparsity and overlap conditions and provide adaptive rates that depend on the decaying labeling mechanism; extensive simulations and a pseudo-random ACIC dataset demonstrate robustness to labeling bias and model misspecification. The framework thus offers practical tools for reliable causal inference in semi-supervised, high-dimensional settings, with implications for generalizability and data integration in observational studies.

Abstract

In modern large-scale observational studies, data collection constraints often result in partially labeled datasets, posing challenges for reliable causal inference, especially due to potential labeling bias and relatively small size of the labeled data. This paper introduces a decaying missing-at-random (decaying MAR) framework and associated approaches for doubly robust causal inference on treatment effects in such semi-supervised (SS) settings. This simultaneously addresses selection bias in the labeling mechanism and the extreme imbalance between labeled and unlabeled groups, bridging the gap between the standard SS and missing data literatures, while throughout allowing for confounded treatment assignment and high-dimensional confounders under appropriate sparsity conditions. To ensure robust causal conclusions, we propose a bias-reduced SS (BRSS) estimator for the average treatment effect, a type of 'model doubly robust' estimator appropriate for such settings, establishing asymptotic normality at the appropriate rate under decaying labeling propensity scores, provided that at least one nuisance model is correctly specified. Our approach also relaxes sparsity conditions beyond those required in existing methods, including standard supervised approaches. Recognizing the asymmetry between labeling and treatment mechanisms, we further introduce a de-coupled BRSS (DC-BRSS) estimator, which integrates inverse probability weighting (IPW) with bias-reducing techniques in nuisance estimation. This refinement further weakens model specification and sparsity requirements. Numerical experiments confirm the effectiveness and adaptability of our estimators in addressing labeling bias and model misspecification.
Paper Structure (34 sections, 31 theorems, 330 equations, 1 figure, 9 tables)

This paper contains 34 sections, 31 theorems, 330 equations, 1 figure, 9 tables.

Key Result

Lemma 2.1

Let Assumption cond:basic hold. Then, for any arbitrary functions $m^*(\cdot)$ and $\gamma_N^*(\cdot)$, as long as either $m^*(\cdot) = m(\cdot)$ or $\gamma_N^*(\cdot) = \gamma_N(\cdot)$ holds but not necessarily both, we have:

Figures (1)

  • Figure 1: Plots of $\log(1+\mathbf{s})=(\log(1+s_{\boldsymbol{\alpha}}),\log(1+s_{\boldsymbol{\beta}}))$ satisfying sparsity conditions with $N=500$, $d=1000$ for (a)-(b) and $N=1000$, $d=5000$ for (c)-(d) : Green = {$f_1(\mathbf{s})\leq r$, $f_2(\mathbf{s})\leq r$, and $f_3(\mathbf{s})\leq r$}; Red = {$f_1(\mathbf{s})\leq r$, $f_3(\mathbf{s})\leq r$, and $f_2(\mathbf{s})>r$}; Blue = {$f_2(\mathbf{s})\leq r$, $f_3(\mathbf{s})\leq r$, and $f_1(\mathbf{s})>r$}; Purple = {$f_3(\mathbf{s})\leq r$, $f_1(\mathbf{s})>r$, and $f_2(\mathbf{s})>r$}. Lines {$f_1(\mathbf{s})=r$}, $\{f_2(\mathbf{s})=r\}$, and $\{f_3(\mathbf{s})=r\}$ are dashed, solid, and dotted. With $R \equiv 1$ and all models well specified, chernozhukov2018double and the R-DR estimator in Section \ref{['sec:gen-DR-DMAR']} require $f_1(\mathbf{s})=o(1)$ (green + red), bradic2019sparsity requires $f_2(\mathbf{s})=o(1)$ (green + blue), and the BRSS estimators only require $f_3(\mathbf{s})=o(1)$ (green + red + blue + purple).

Theorems & Definitions (66)

  • Lemma 2.1: Identification of $\theta_1$
  • Theorem 2.2: Asymptotic results for $\widehat{\theta}_{1,\hbox{\tiny R-DR}}$
  • Remark 1: Necessity and usefulness of the decaying PS
  • Remark 2: The rate DR property
  • Theorem 4.1: BRSS
  • Remark 3: Robust inference
  • Theorem 4.2: DC-BRSS
  • Remark 4: Theoretical challenges in ATE estimation
  • Remark 5: The treatment PS estimation
  • Remark 6: Enriched robustness compared to the BRSS estimator
  • ...and 56 more